BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A12LP1|AL428155
(926 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1727 1760 0.0
>3x_Contig1727
Length = 17872
Score = 1760 bits (887), Expect = 0.0
Identities = 917/927 (98%), Gaps = 1/927 (0%)
Strand = Plus / Plus
Query: 1 gatcacctagctcacaggagtgagagctgaacggccggcaacgggtcgtccatcgaccag 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 13582 gatcacctagctcacaggagttagagctgaacggccggcaacgggtcgtccatcgaccag 13641
Query: 61 ccattgactaacctattatcccagcgggcgggtataaggagaggccaaaacacacacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13642 ccattgactaacctattatcccagcgggcgggtataaggagaggccaaaacacacacact 13701
Query: 121 gggaaatccgaatcactgttcaaaacctccgtctgtcctgtcccctcaacattttgaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13702 gggaaatccgaatcactgttcaaaacctccgtctgtcctgtcccctcaacattttgaggg 13761
Query: 181 atttttattgttcaaaacttcttatttcctttgattacaaacattaactccagcgacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13762 atttttattgttcaaaacttcttatttcctttgattacaaacattaactccagcgacagg 13821
Query: 241 cgatgatggtacctggtgcttctgccaggcaatggctagcgttatagccatttctactgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13822 cgatgatggtacctggtgcttctgccaggcaatggctagcgttatagccatttctactgc 13881
Query: 301 ctcgagtccgggtaacagaacgcatactgaaaaagagagagacttcgtctctctctctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13882 ctcgagtccgggtaacagaacgcatactgaaaaagagagagacttcgtctctctctctct 13941
Query: 361 ctctctctctccagcgcatttggctgaacctgtaaacagaacagcgcgctgcgcagcgcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13942 ctctctctctccagcgcatttggctgaacctgtaaacagaacagcgcgctgcgcagcgcg 14001
Query: 421 -tgttcttnnctcatttttttttgttgacaaatataccacatacggcaacattgccgtat 479
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14002 ctgttctgttctcatttttttttgttgacaaatataccacatacggcaacattgccgtat 14061
Query: 480 gttggaaaaaacgtgggaataacccatcgtttgcgggatataatgccaccatgcatgcca 539
|| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14062 gtggtataaaacgtgggaataacccatcgtttgcgggatataatgccaccatgcatgcca 14121
Query: 540 gtacaccacgcatacttcccaccgcatttcgtcattgcgtaatttcgaccaatctctcat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14122 gtacaccacgcatacttcccaccgcatttcgtcattgcgtaatttcgaccaatctctcat 14181
Query: 600 aaccaaaatccattttgaaaagaaaaatttcatccaaaaacaataacaaaagcatgctac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14182 aaccaaaatccattttgaaaagaaaaatttcatccaaaaacaataacaaaagcatgctac 14241
Query: 660 acggccgaatctctgtctaaacgagaaatcgtccgctttttttcttaatactgtttctgc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14242 acggccgaatctctgtctaaacgagaaatcgtccgctttttttcttaatactgtttctgc 14301
Query: 720 tcaaattttctttttgagtgatttttggattatctctctctctctctctctaagcagata 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14302 tcaaattttctttttgagtgatttttggattatctctctctctctctctctaagcagata 14361
Query: 780 agatttgggtaatcaaagaaagaaccacacacagttcgagaatattcacaatattcatag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14362 agatttgggtaatcaaagaaagaaccacacacagttcgagaatattcacaatattcatag 14421
Query: 840 tgttaagaggttctttaaggttgggaaatttagtattgttggtacttagtgggttgataa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14422 tgttaagaggttctttaaggttgggaaatttagtattgttggtacttagtgggttgataa 14481
Query: 900 aattgtatatatdaggggaactcgcct 926
|||||||||||| ||| ||||||||||
Sbjct: 14482 aattgtatatataaggagaactcgcct 14508
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8535
Number of Sequences: 1807
Number of extensions: 8535
Number of successful extensions: 447
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)